Thursday, 2 March 2017

The domestic dog, our enigmatic friend

image from How Stuff Works
Humans have been training, using and relating to dogs for 15,000 years, since the dawn of civilisation. How the domestic dog emerged from wolves is not known: the DNA, archaeological and cultural evidence is confusing. Selective breeding is obviously involved but an experiment with a population of silver foxes in Russia shows that dog-like tameability can be cultivated over 50 years: millenia are not required. (I'm not sure why foxes were chosen, as opposed to wolves, but I imagine the principle must be the same.)

I have never owned a dog and have tended to be rather wary of them; but recent news items and documentaries together with the insights of Hugh Ross in his  Hidden Treasures in the Book of Job have caused me to appreciate what remarkable and unique animals they are. You have probably observed or heard about at least some of their attributes  but you may not have seen them listed together so I hope the following list will be interesting and inspire you to think more about them.

Diversity within the species

Size and appearance vary enormously over some 200 varieties, ranging from the Pekingese to the Great Dane, yet we all recognise them as belonging to the same species. They have a unique genetic code which makes it possible to achieve this diversity by selective breeding. Even character traits differ with the breed and I wonder if this could have something to do with epigenetics, by which learned behaviour (e.g. hunting or retrieving in the case of our canine friends) can be passed on to at least the 3rd generation.

Sense of smell

This is staggering. They can detect the presence of one spoonful of sugar in a million gallons of water ( = 2 Olympic swimming pools). They can also locate the source of a smell because they have a nose in which the nostrils are far apart in relation to the diameter of each and are able to tweek each nostril independently. This obviously makes dogs very useful – e.g. in explosives detection and tracking by scent. See also the dog's dazzling sense of smell

Facial expressiveness

Humans see them as able to smile and look guilty. It makes it easier to relate to dogs more than any (or almost any?) other animal. Research by Alexandra Horowitz  (‘Disambiguating the ‘guilty look’: salient prompts to a familiar dog behaviour’, Behavioural Processes, July 2009, p.447-52) indicates that the guilty expression is associated with the desire to please the owner, not with any innate sense of guilt as is felt by humans.

Facial recogniton

Dogs are able to recognise the face, not just the scent, of their owners, see this abstract from the Journal of vision.  They can also pick one out in a crowd and, again, experiments have eliminated the possibility of scent. Dogs can recognise other dogs from hundreds of photographs of all shapes and sizes.

Ability to read cues or read minds

Dogs sometimes seem able to read minds but research by Mark Petter et al (‘Can dogs detect human deception?’, Behavioural Processes, October 2009, p.109-18) suggests that in fact they are picking up subtle visual cues. Yet there is so much anecdotal evidence of telepathy that this question must remain open. I know of cases where a dog can detect whether its owner is on the way home from work, although it could be that he is picking up the owner’s scent.

Consolation of humans in distress

Sensitivity to human distress is widely reported and research by Custance and Mayer reported in the Economist (July 30 2012) on a dog’s tendency to console a person who is crying confirms that this is a real phenomenon. The behaviour is definite but could it be that the dog’s hypersensitivity to smell detects certain olfactory signals which the body may emit when emotionally distressed? In any case, it is a remarkable gift to a person in distress.


It is well known that dogs normally show great loyalty to their owners and respond to their affections.


Many owners report signs of jealousy and I came across this report of an experiment reporting this.

Trainability and usefulness

Of all the animals there is something about dogs that makes them more trainable than any other. This together with their skills and attributes make them extremely useful and companionable to humans.

Servants to the lost, the blind and the sick

The ability of dogs to track escaped criminals, retrieve prey, catch pests, herd sheep, rescue victims in disaster zones, act as guides for the blind or partially sighted and sooth the anxious is well known. It is also generally accepted that owners of dogs live longer and healthier lives. However, recently there have been startling findings on their use in detecting dangerously lowblood sugar levels in diabetics and in warning of epileptic attacks, typically ten minutes ahead.  Dogs can also detect cancer long before it can be diagnosed by modern medicine.

All the above is not to say that dogs can’t also be problems if adopted as pets or working dogs by the wrong owners or owners in the wrong circumstances.  Yet in the history of civilisation they have had an overwhelmingly positive role, one that continues to grow.

 The average neo-Darwinist evolutionary biologist will interpret all this as the product of random mutations, the laws of physics, natural selection, domestication and breeding by human beings. This is a very restricted (boring?) and materialistic view of reality. As a Christian I think these remarkable creatures are also gifts from God to us and that we, unlike any other creature, are made in the image of God, the imago dei. Which is why we are writing blogs about dogs, protecting them against cruelty and organising dog shows; and they are not having international conferences on us. They are there to reflect the human soul and teach us how to relate to God, perhaps because they are in a sense closer to God, being free of egotistical self consciousness.

 See also Scientific American blog and links

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Wednesday, 22 February 2017

Climate change checklist

My belief is that climate change is likely over the coming decades and that we should prepare for it, both  by reducing emissions and taking measures to protect us from floods and extreme weather events. However, we need to retain humility and recognize that effects known only to the Creator could occur (e.g.:  the influence  of dark matter or some cosmic connection via quantum entanglement. As a layman I have already seen references to this in the literature.).

The list below is a reminder of the complexity of the problem of predicting climate change. Please contact me (John Sears) via

if you think it needs modifying.

NASA image

Radiant energy output of sun. This has increased by around 25% since the sun was formed, i.e. over more than 4 billion years.  Very small variations occur over decades and centuries and bear some relationship to the number of sunspots (which is related to solar activity). The Little Ice Age  included  a period of low sunspot activity, with no sunspots observed over 1650-1700, when the mean temperature was lowest.

Milankovitch cycle. The amount of sunlight reaching the earth varies according to the changing shape of the earth’s orbit (eccentricity), the tilt of the N-S axis and the precession of this axis. The crucial factor appears to be the amount of sunlight falling on the northern hemisphere in any one year. Milankovitch (1970s, Serbia)  showed that the coming and going of ice ages over the last 600,000 years was due to these factors.  If there were no other factors we would expect to be entering another ice age now, instead of a warm period.

Heat from below the crust. The biosphere has more heat going into it than can be accounted for by the sun. The difference is believed to be due to  radioactive decay in the earth’s core.

Gravitational effects.There are  gravitational influences on climate which could become large in certain situations (chaos theory shows that very small events, like the fluttering of a butterfly, can potentially have dramatic effects, such as a storm on the other side of the world). The gravity exerted at the earth's surface varies very slightly with time and position due to inhomogeneities in the crust, mantle and core. Even small changes in these factors could potentially set off major changes not allowed for by present climate models. Even small changes in the orbit of the moon and planets would have huge effects (E.g. If a large asteroid caused a perurbation in the sun-moon system. Jupiter's motion is also crucial to the stabiity of Earth's orbit).

Atmospheric composition. The importance of this arises from the way it affects the absorption and reflection of radiation coming in from the sun or being reflected back upwards from the earth’s surface. Carbon is the main gas responsible fo the greenhouse effect – it acts like the glass in a greenhouse to trap in heat. Methane is also a greenhouse gas, much more powerful than CO2 but also much less prevalent.

Plants.  While alive these take in carbon dioxide from the air, thereby cooling it through the reduced greenhouse effect. But as they decay they give it out again,  but over a longer period. Large areas of trees affect the climate not only in this way but also by their moistening effect on the air.The Amazon rain forest appears to have a pivetol role in determining the global climate.

Animals . The main effect of these is due to the methane from  their defecated waste and rotting carcasses. Methane produced in this way is more of a problem than automobile greenhouse emissions as livestock herds grow in response to the westernization of diets in China, India etc.

Microscopic life. Bacteria and spores living in  land, sea and air sometimes affect rainfall. E.g. spores in the ocean can be whisked up into the atmosphere by strong winds and dispersed. Here they act as condensation nuclei for the formation of the water drops and thence clouds. Insects can reduce the balance of combustible debris in a forest and this in turn means fewer and smaller forest fires emitting CO2.

Clouds. The type of cloud and its coverage affect the amount of sunlight striking the earth’s surface and the amount of radiation reflected back to its surface instead of radiated away into space. They have been and still are a problem in creating climate models.

Atmospheric convection.  Heat from the ground boils up the air and the convection currents (i.e. wind) produced distribute warm air over the planet and also affect the cloud type, amount and global distribution. This in turn affects temperature, rain and snow.  Hurricanes, tornadoes, gales and the jet stream are all driven by atmospheric convection.

Ocean currents. The bulk of the heat in the biosphere which we inhabit is stored in the ocean and it is the global currents in the sea (e.g. the Gulf  Stream) which determine the global patterns of temperature in the air over the sea.

Methane from seabed and tundra deposits. As the climate warms it releases large bubbles of methane trapped in fozen deposits under the ocean or in tundra.  This causes further warming. It is 21x as powerful as carbon dioxide as a greenhouse gas and is produced by a certain kind of bacteria.

Polar ice caps. Both Arctic and Antarctic  ice sheets reflect large amounts of heat from the sun back into space. Small reductions in area cause significant increases in the amount of heat absorbed from the solar heat reaching the earth’s surface. Similarly, the greater the ice coverage  the more incident radiant heat will be reflected.

Snow cover. As with snow in the polar regions the snow settled on large mountain ranges like the Himalayas and the Alps affects the percentage of solar radiation reflected or absorbed by the earth’s surface.  

Melting glaciers.  When a glacier melts it not only leads to possible flooding but reduces the area of the planet which reflects incident sunlight away from the surface, i.e. the ground retains incident solar energy instead of reflecting it  back into space. When melt water flows into the sea it dilutes the concentration of salt in the seawater and this has a major effect on ocean currents which in turn affects the climate. (The more salt the denser the water.)

Sea ice. As with glaciers and snow, melting of sea ice (icebergs) reduces the % of sunlight reflected back into space. It also reduces the salinity and hence density of seawater, which affects ocean currents which themselves affect the distribution of heat in the oceans.  However, melting icebergs maks no difference to sea levels.

Volcanoes. Eruptions from these inject huge amounts of sulphur dioxide into the air and, like carbon dioxide and methane, this produces a greenhouse effect. The ash and dust from eruptions also affects cloud formation and directly blots out sunlight.

Carbon dioxide absorption by weathering of rocks. About 1 billion tons per annum of atmospheric carbon dioxide is absorbed by weathering of silicate rocks. This compares to 30 billion tons emitted by civilisation. Such absorption is associated with the plate tectonic cycle which has been important in keeping air temperature constant over hundreds of millions of years.

Meteor  impacts. Hits by large meteors can have global repercussions including climate change. If a large enough object hit the earth it would of course cause a mass extinction event, like the one which wiped out the dinosaurs 66 million years ago.

Cosmic rays.  These  can also affect cloud formation , since the particles which make up cosmic rays can cause nucleation of water drops.  There does seem to be some link between them and average temperature/rainfall.

Human activity. Carbon dioxide from fossil fuel burning and methane from livestock farming are the main human source of global warming gases which appear to be tipping the global balance towards warming rather than the cooling we would expect according to the Milankovitch cycle (see above).

John Sears
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Monday, 6 February 2017

Hold on to the Truth, not the Theory of Everything

While there is life there is hope...
The film Theory of Everything sounds as though it was inspirational. It ought to be since Hawking is admirable for his will power in overcoming the limitations of his illness and using his powerful, creative mind to explore the limits of human knowledge. However, one has to bear in mind that a human being can only go so far. Recent science and philosophy shows that a real theory of everything is untenable - mainly because the 'everything' that such a theory would need to describe would include itself - a logical impossibility.  

I understand that Hawking himself has come to accept this since writing A Brief History of Time. Having abandoned this quest he seems to have become less than rational in his understanding of reality, as I hope to demonstrate below. He is not alone and I contend that the approaches of some theoreticians to the limits we are now coming across in trying to explain properties of the cosmos like fine tuning for life and the emergence of space-time (Big Bang) from existential nothingness are bizarre and unscientific, and arise from an understandable but needless fear of resorting to a god of the gaps.

Science is precious not only as a voyage of discovery but as the source of the prosperity of western civilisation through engineering, agriculture, transport, hygiene, and medicine, and more recently of other parts of the world which have followed its methods. But it needs guarding, especially with the notions of a 'post-truth' society and 'fake news' being talked about in the media without, I maintain, any general acknowledgement of the catastrophic implications for science, democracy and civilization.

A few years ago I read a timely criticism of the way science is reported in the popular press and interpreted by society at large (Bad Science, by Ben Goldacre). The cover blurb lists scaremongering journalists, pill pushing nutritionists, flaky statistics and evil pharmaceutical corporations.  Most of these distortions of objective truth come from outside the scientific establishment, threatening it with commercial or grant-related pressures.

Yet there is another enemy of academic research, in my view more insidious. It comes from the academics themselves.

In the 14th century the priest William of Occam proposed a concept which has been religiously followed by scientists to this day and is a cornerstone on which the exponential ascent of Western science has been built: Occam’s razor : a new scientific theory should explain the greatest number of phenomena for the least number of assumptions.  A theory which satisfies this criterion and which can be experimentally verified is deemed one step closer to an objective truth for which scientists strive, knowing that they will never reach it, but that what counts is the constant search for it.

There has also been a belief in the sacredness of truth. Professor James Lovelock, who professes not to be a religious man, recently referred to it as the ‘Holy Ghost’ of truth. In a BBC Beautiful Minds documentary Lovelock related how a prominent neo-Darwinist (Richard Dawkins) had bullied the editor of Nature into suppressing Lovelock's now widely acclaimed ideas on earth systems science, later known as Gaia. In March 1995 Dawkins also purportedly pressurised the editor of the Times Higher Education Supplement into not publishing a commissioned article, already trailored to appear in the next edition, since it attacked neo-Darwinism. See the Open Society and its Enemies. Such practices risk turning the foundation of science into sand and undermining the  power of peer reviewed academic publishing.

At the time the Big Bang theory of cosmology was first proposed Fred Hoyle (a leading astrophysicist and cosmologist at the time) opposed it in the face of mounting evidence, simply because he thought it implied the existence of a Creator. Instead he proposed a steady state model in which the universe was eternal and atoms just spontaneously appeared in the vacuum. A definite case of letting one's beliefs get in the way of truth. (Hoyle later appeared  to abandon scientific materialism and in the last book he wrote before his death, Cosmic Life Force, concluded that the universe had a mind.)

The Grand Design by Stephen Hawking and Leonard Mlodinow (2010) is a well written guided tour of modern elementary particle physics and cosmology which I found absorbing, if taxing in parts. I can certainly recommend this as a way of understanding how modern physicists attempt to interpret reality.

However, it resorts to post modern metaphysics, namely the abandonment of objective reality, the basis on which physics, chemistry, biology and engineering is built:

'Though realism may be a tempting viewpoint, as we'll see later, what we know about modern physics makes it a difficult one to defend.'

[22% through the book on my  old iPhone Kindle app]

Even special relativity theory acknowledges an objective reality and works out by mathematics (the Lorentz transformations)  how time, space and mass will seem to observers moving at different relative speeds. All its equations are verified by experiment. Quantum phenomena are difficult to pin down and very odd; e.g. in the famous double-slit experiment a pattern appears on a screen hit by particles according to whether one determines or does not determine the paths by which they arrive (NB: the experiment is so designed that measuring the path does not physically disturb the particle). This is no basis for abandoning belief in an objective reality: the challenge is to modify our models of reality, i.e. get a bit closer to the ultimate reality,  until we get some powerful model which incorporates those happenings which at present do not appear to make sense. Lightning did not make sense before the concept of electricity was devised and if you have ever had an electric shock you will know that the concept of electricity corresponds to something real.

Instead, Hawking (who other physicists disagree with)   throws out objective reality, adopts unsound mathematics (e.g. subtracting infinities from infinities) and makes non sequitur extrapolations from bizarre pictorial interpretations of a mathematical tool (Feynman’s ‘sum over histories’ method) for calculating the probability of a quantum event and links this to cosmology on the grounds that our universe probably started as a quantum phenomenon. The authors give up on trying to explain rigorously what they call our ‘apparently’ miraculous universe, which they admit is fine tuned for life to an inexplicable degree, and think they avoid the need to do so by postulating an unimaginably large number of other universes (10 with 500 zeros after it; there are 'only' 10 with 80 zeros atoms in the whole universe) with laws loosely defined by a network of string theories collectively called M-Theory, and an arbitrary number of dimensions (11 instead of the 4 we know: 3 of space and 1 of time; why not 10, or 99, or 100, or 1000 or any number you can think of?) ), all as much beyond scientific testing as Santa Claus. How such a monster assembly ever came into being is not mentioned.  It certainly does not 'explain' why  or even how sentient truth-seeking, love-seeking, morally aware beings originated or evolved  here, or anywhere else in our universe.       

This approach explains nothing and everything. If we observe a new unexplained phenomenon there is no need to delve into it, invent a radical new approach  and laboriously come up with a rigorously peer reviewed, testable theory, as Einstein did. Just say it is there by chance and was bound to happen in some universe somewhere. Suppose someone found that viruses on earth were spontaneously assembling in synchronization with fluctuations observed from a black hole. No need to explain. It just happens to occur in our universe. No surprise! If it had not started we, having emerged from viruses by chance, perhaps,  would not be here to see it.

William of Occam must be spinning in his grave, as must Newton and Einstein.

Science has reached an  impasse. Quantum phenomena like the double slit experiment, quantum erasure and entanglement have been modelled in several different ways, none of them sufficiently established to serve as a consensus theory. Attempts to unify the 4 forces of nature (electromagnetic, gravity, weak nuclear and strong nuclear) are in disarray, as appears to be indicated by the Large Hadron  Collider results, despite the recent confirmation of the Higgs boson. Even if a Unified Theory is achieved it will only be a theory of certain aspects of reality, not a Theory of Everything.

Cosmology is also confronting questions over inflation, the holographic principle (by which  our 4D space-time world would be the encodement of a 2D world), dark energy, dark matter, vacuum energy and much else. Over 95% of the stuff of the universe is a complete mystery, as is the way both ordinary and dark matter is orchestrated. All we know is that something is there and that some phenomena occur which can be predicted and modelled.

 Neo-Darwinism, though still having something to offer in terms of micro-evolution, struggles to come to terms with increasingly sophisticated mechanisms of macro-evolution, e.g. epigenetics, horizontal gene transfer, emergent complexity, sudden leaps forward in speciation and evolutionary convergence, which do not fit well with  blind adherence to evolution by descent with random incremental modifications. On the actual origin of life it has nothing substantive to offer. For some reason these increasingly compelling new findings in evolutionary biology are not getting into BBC science shows such as Horizon yet they should be embraced, not brushed aside. I have not yet come across a major science programme which stresses the importance of the recent discovery that the 98% of DNA referred to as junk only a decade ago is now accepted as being crucially functional. Recent discoveries showing that evolutionary pathways repeat themselves indicate that the mechanism of evolution is not random. Again, barely a mention in the popular science media. What the situation is in school biology teaching I dread to think.

When confronted with the inexplicable it is surely the job of the scientist to find new more powerful models, not retreat in denial or in order to satisfy some favoured view or ethos or ideology or metaphysical view or theology, or just to get career advancement or funding or the approval of the press or one’s friends.

 It is of course impossible to eliminate these worldly influences but, whether one is a scientist, an interested layman (like me) who enjoys witnessing God's wondrous creation  or just one who wants the world to go on advancing in a benevolent way, one can at least try to hold on to scientific truth as an ideal.  Science is not, I maintain, the only answer to human fulfillment; but it is a God-given gift without which material human progress stops. We descend into chaos with no prospect of a peaceful, prosperous life in the material world.

 John Sears


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